The Community Phages team


  • Tom Bernhardt

    Professor - Department of Microbiology

    I have had a long interest in phages dating back to my graduate studies at Texas A&M University. There, I investigated the mechanisms by which phages lyse (blowup) their bacterial hosts to release progeny viruses so that they can go on to infect new hosts. Over the years, my lab has mainly focused on studies of bacterial cell biology and cell surface biogenesis. However, in recent years we have begun studying phages of corynebacteria and using them to help us understand how this class of bacteria grows. I am excited to work with you on the identification and characterization of new corynephages from the environment. There is great potential in this work to develop new tools for our studies and to discover new biological mechanisms.


  • Michael Baym

    Associate Professor - Department of Biomedical Informatics and Microbiology

    I came to phages from a longstanding interest in bacterial evolution, particularly in the evolution of antibiotic resistance. I’m interested in both phages that can be used to kill antibiotic resistant bacteria and the role they play in the spread of the genes that cause antibiotic resistance. I am excited for you to discover phages that affect the horizontal transfer of genes between bacteria, and to potentially use those phages and the biology we learn from them to better address antibiotic resistance.


  • Philip Kranzusch

    Professor - Department of Microbiology

    I am interested in how cells sense and defend against viral infection. My lab uses biochemistry to study how human cells recognize viruses and how bacteria detect replication of phages. We have been surprised to learn from our research that these processes are closely related, and human cells and bacteria use similar mechanisms to resist virus replication. I am excited to work with you to identify new phages and discover how bacteria and phages can teach us more about human immunity.


  • James Spencer

    Lab Manager - Bernhardt Lab

    As a former bench scientist and current lab manager, it’s my goal to create and maintain an environment that makes your experience in the lab as safe, seamless, and productive as possible. I find fulfillment in ensuring that we will have everything we could need to make the science happen, both at the bench and behind the scenes. I am excited to see the great work that you’ll be able to do during your time in this program.


  • Ellie Rand

    Lead Instructor

    I recently completed my PhD in the Baym lab and am fascinated by the diversity of microbes in the environment. For my PhD project, I developed a novel method to isolate environmental phages that will hopefully be useful for ecological and clinical research in the future. I love exploring new samples, and I can’t wait to see what we find this summer!


  • Molly Sargen

    Instructor

    I am fascinated by bacteria and all the intricate systems they use to survive as single cells. I am particularly interested in understanding how prophages, bacterial viruses that integrate in bacterial genomes, co-exist with each other and their bacterial hosts. During my PhD I studied prophages in Salmonella and the anti-phage defense systems they encode. I am excited to learn more about new phages!


  • Kristopher Kennedy

    Postdoctoral Fellow – Hochschild Lab

    Many years ago, I was a struggling student at Pierce Community College in Los Angeles. One of my professors urged me to join a summer research program similar to Community Phages. At the time, I didn’t understand what I was signing up for or why my professor was so insistent that I try it out. But I had so much fun learning how to conduct experiments that summer, that I began taking my education seriously enough to pursue a science career. Nowadays, I’m a postdoctoral researcher trying to figure out how bacterial cells and their viral adversaries (phages) handle errors in protein production. Understanding how organisms deal with different types of protein errors may inform us about the evolution of cellular life and have important implications for human health and disease. This summer, I’m excited to join you, assist you, and learn alongside you in your hunt for new phages!


  • Amelia McKitterick

    Postdoctoral Fellow - Bernhardt Lab

    I am interested in understanding how phages interact with their host bacteria to gain control during infection, and how this knowledge can teach us about the special ways different bacteria grow and divide. I think through studying phages, we can ask big picture questions about bacterial and pathogen evolution as well as microbial community dynamics that can teach us more about the larger world around us. I am also passionate about sharing my love of research with others and can’t wait to spread the joy of lab work to a new set of researchers.


  • Brendan O'Hara

    Postdoctoral Fellow - Dove Lab


  • Doug Wassarman

    Postdoctoral Fellow - Kranzusch Lab

    I am interested in studying how cells defend themselves from viruses and the ways that viruses avoid these defenses. Some of our very own immune pathways and some of the most important biotechnologies can be traced back to the evolutionary battle between phages and bacteria. I am excited to work with you to identify new phages that can teach us about the innovative strategies bacteria and phages are using against one another.


Diversity and Equity Mission

Community Phages is committed to providing an engaging and immersive research experience. We recognize that there have been systemic injustices in the historical distribution of scientific research opportunities and support. Thus, we strive to facilitate an equitable and inclusive environment in which all students may feel supported and provided with opportunities to flourish.


Acknowledgments

The Community Phages program was inspired by the HHMI SEA-PHAGES program. Protocols and materials have been adapted or reproduced with permission. We are grateful to Viknesh Sivanathan from HHMI for assistance in the conception and funding of this program.


Table of contents